CBX5

Information CBX5

Description

This gene encodes a highly conserved nonhistone protein, which is a member of the heterochromatin protein family. The protein is enriched in the heterochromatin and associated with centromeres. The protein has a single N-terminal chromodomain which can bind to histone proteins via methylated lysine residues, and a C-terminal chromo shadow-domain (CSD) which is responsible for the homodimerization and interaction with a number of chromatin-associated nonhistone proteins. The encoded product is involved in the formation of functional kinetochore through interaction with essential kinetochore proteins. The gene has a pseudogene located on chromosome 3. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Jul 2008]

Full Name

chromobox 5

Source NCBI

ReMap Statistics

Datasets
2
Biotypes
2
Peaks
22,254
Non-redundant peaks
19,997

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000094916
UniProt
P45973
Genevisible
P45973
RefSeq
NM_001127321
Aliases
HEL25; HP1; HP1-ALPHA; HP1A; HP1Hs-alpha
All peaks CBX5
Download BED file
Non redundant peaks CBX5
Download BED file
SEQUENCES CBX5
Download FASTA file
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Datasets Table for CBX5

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
CBX5 GM12878 ENCODE Homo sapiens ENCSR372GIN 12,750
CBX5 K-562 ENCODE Homo sapiens ENCSR272JAT 9,504
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.