CBX1

Information CBX1

Description

This gene encodes a highly conserved nonhistone protein, which is a member of the heterochromatin protein family . The protein is enriched in the heterochromatin and associated with centromeres. The protein has a single N-terminal chromodomain which can bind to histone proteins via methylated lysine residues, and a C-terminal chromo shadow-domain (CSD) which is responsible for the homodimerization and interaction with a number of chromatin-associated nonhistone proteins. The protein may play an important role in the epigenetic control of chromatin structure and gene expression. Several related pseudogenes are located on chromosomes 1, 3, and X. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Jul 2008]

Full Name

chromobox 1

Source NCBI

ReMap Statistics

Datasets
2
Biotypes
2
Peaks
102,499
Non-redundant peaks
91,221

TF Classification

Super Class
Unknown
Class
Unknown
Familly
Unknown
Sub Familly
Unknown

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000108468
UniProt
P83916
Genevisible
P83916
RefSeq
NM_001127228
Aliases
CBX; HP1-BETA; HP1Hs-beta; HP1Hsbeta; M31; MOD1; p25beta
All peaks CBX1
Download BED file
Non redundant peaks CBX1
Download BED file
SEQUENCES CBX1
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for CBX1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
CBX1 Hep-G2 ENCODE Homo sapiens ENCSR819WZE 69,306
CBX1 K-562 ENCODE Homo sapiens ENCSR948QLZ 33,193
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.