CBFB

Information CBFB

Description

The protein encoded by this gene is the beta subunit of a heterodimeric core-binding transcription factor belonging to the PEBP2/CBF transcription factor family which master-regulates a host of genes specific to hematopoiesis (e.g., RUNX1) and osteogenesis (e.g., RUNX2). The beta subunit is a non-DNA binding regulatory subunit; it allosterically enhances DNA binding by alpha subunit as the complex binds to the core site of various enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers and GM-CSF promoters. Alternative splicing generates two mRNA variants, each encoding a distinct carboxyl terminus. In some cases, a pericentric inversion of chromosome 16 [inv(16)(p13q22)] produces a chimeric transcript consisting of the N terminus of core-binding factor beta in a fusion with the C-terminal portion of the smooth muscle myosin heavy chain 11. This chromosomal rearrangement is associated with acute myeloid leukemia of the M4Eo subtype. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Full Name

core-binding factor subunit beta

Source NCBI

ReMap Statistics

Datasets
4
Biotypes
4
Peaks
116,505
Non-redundant peaks
91,436

TF Classification

Super Class
Unknown
Class
Unknown
Familly
Unknown
Sub Familly
Unknown

Source TFClass

External IDs

JASPAR
Ensembl
ENSG00000067955
UniProt
Q13951
Genevisible
Q13951
RefSeq
NM_001368707
Aliases
PEBP2B
All peaks CBFB
Download BED file
Non redundant peaks CBFB
Download BED file
SEQUENCES CBFB
Download FASTA file
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Datasets Table for CBFB

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
CBFB GM12878 ENCODE Homo sapiens ENCSR860UHK 33,173
CBFB SKNO1 GEO Homo sapiens GSE23730 17,247
CBFB SaOS-2 GEO Homo sapiens GSE76937 11,845
CBFB ME-1 GEO Homo sapiens GSE46044 54,240
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

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The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.