BPC1

Information BPC1

Description

BASIC PENTACYSTEINE1 (BPC1) is a regulator of the homeotic Arabidopsis thaliana gene SEEDSTICK (STK), which controls ovule identity. BPC1 induces conformational changes by cooperative binding to purine-rich elements present in the STK regulatory sequence. STK is upregulated in bpc1 mutant.

Full Name

basic pentacysteine1

Source NCBI

ReMap Statistics

Datasets
2
Biotypes
2
Peaks
3,411
Non-redundant peaks
3,382

TF Classification

Familly
BBR/BPC
Sub Familly
NA

Source AtTFDB

External IDs

JASPAR
MA1404
Ensembl
AT2G01930
UniProt
Q9SKD0
Genevisible
Q9SKD0
RefSeq
NM_201669.2
Aliases
All peaks BPC1
Download BED file
Non redundant peaks BPC1
Download BED file
SEQUENCES BPC1
Download FASTA file
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Datasets Table for BPC1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
BPC1 Col-0 Col-0_leaves tnt_col GEO Arabidopsis thaliana GSE60141 297
BPC1 Col Col_whole-plant 30h GEO Arabidopsis thaliana GSE84483 3,114
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.