ABI5

Information ABI5

Description

Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.

Full Name

Basic-leucine zipper (bZIP) transcription factor family protein

Source NCBI

ReMap Statistics

Datasets
3
Biotypes
2
Peaks
12,256
Non-redundant peaks
8,624

TF Classification

Familly
REM
Sub Familly
NA

Source AtTFDB

External IDs

JASPAR
MA0931
Ensembl
AT2G36270
UniProt
Q9SJN0
Genevisible
Q9SJN0
RefSeq
NM_129185.4
Aliases
All peaks ABI5
Download BED file
Non redundant peaks ABI5
Download BED file
SEQUENCES ABI5
Download FASTA file
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Datasets Table for ABI5

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
ABI5 Col-0 Col-0_seedling 36h-wt GEO Arabidopsis thaliana GSE60142 3,323
ABI5 Col-0 Col-0_seedling 36h-ypet GEO Arabidopsis thaliana GSE60142 8,475
ABI5 Col-0 Col-0_leaves tnt_col GEO Arabidopsis thaliana GSE60141 458
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.