RKO

Information for RKO

Description

Human colon carcinoma cell line. RKO is a poorly differentiated colon carcinoma cell line developed by Michael Brattain. The RKO cell line is the parental cell line (isogenic) of RKO-E6 and RKO-A545-1.

Source BRENDA Tissue Ontology (BTO)

ReMap Statistics

Datasets
2
Transcriptional Factors
2
Peaks
37,567
Non-redundant peaks
34,611

Description

Cell_name
RKO cell
Category
Cancer cell line
Disease
NCIt; C4910; Colon carcinoma
Sex_gender_of_cell
Sex unspecified
Age_of_donor
Age unspecified

External IDs

Cellosaurus
CVCL_0504
Experimental Factor
EFO_0001232
BRENDA Tissue
BTO:0001890
Wiki
RKO
ATCC
RKO
Synonyms
All peaks RKO
Download BED file
Non redundant RKO
Download BED file
DOWNLOAD All ReMap
Go to catalogue

Datasets Table for RKO

Biotype Biotype modification Ecotype Target name Target modification Source Species Experiment Peaks
RKO BRD1 GEO Homo sapiens GSE47190 Download (27,145)
RKO ZEB1 GEO Homo sapiens GSE88734 Download (10,422)
Biotype Biotype modification Ecotype Target name Target modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.