HUDEP-2

Information for HUDEP-2

Description

Source BRENDA Tissue Ontology (BTO)

ReMap Statistics

Datasets
11
Transcriptional Factors
5
Peaks
435,428
Non-redundant peaks
206,459

Description

Cell_name
HUDEP-2
Category
Transformed cell line

External IDs

Cellosaurus
CVCL_VI06
Experimental Factor
BRENDA Tissue
Wiki
HUDEP-2
ATCC
HUDEP-2
Synonyms
HUDEP2; Human Umbilical cord blood-Derived Erythroid Progenitor-2
All peaks HUDEP-2
Download BED file
Non redundant HUDEP-2
Download BED file
CRMs HUDEP-2
Download BED file
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Datasets Table for HUDEP-2

Biotype Biotype modification Ecotype Target name Target modification Source Species Experiment Peaks
HUDEP-2 BCL11A-ER-V5 BCL11A GEO Homo sapiens GSE103445 Download (13,950)
HUDEP-2 ZBTB7A GEO Homo sapiens GSE103445 Download (40,042)
HUDEP-2 30min BCL11A GEO Homo sapiens GSE104676 Download (30,605)
HUDEP-2 60min BCL11A GEO Homo sapiens GSE104676 Download (84,894)
HUDEP-2 90min BCL11A GEO Homo sapiens GSE104676 Download (52,305)
HUDEP-2 BCL11A-KO BCL11A GEO Homo sapiens GSE104676 Download (109)
HUDEP-2 CRISPR_115edit_60min BCL11A GEO Homo sapiens GSE104676 Download (85,456)
HUDEP-2 30min CTCF GEO Homo sapiens GSE104676 Download (58,456)
HUDEP-2 30min GATA1 GEO Homo sapiens GSE104676 Download (50,129)
HUDEP-2 S2 KLF1 GEO Homo sapiens GSE97671 Download (8,490)
HUDEP-2 S4 KLF1 GEO Homo sapiens GSE97671 Download (10,992)
Biotype Biotype modification Ecotype Target name Target modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.