Col-0_somatic-embryo

Information for Col-0_somatic-embryo

Description

A plant embryo (PO:0009009) that arises from previously differentiated somatic cells, rather than from fused gametes, i.e. the plant zygote (PO:0000423).

Source BRENDA Tissue Ontology (BTO)

ReMap Statistics

Datasets
1
Transcriptional Factors
1
Peaks
16,508
Non-redundant peaks
16,508

Description

Biotype name
Col-0_somatic-embryo
Ecotype
Col-0

External IDs

Araport
somatic-embryo
AraPheno
somatic-embryo
Experimental Factor
somatic-embryo
BRENDA Tissue
somatic-embryo
Wiki
Col-0_somatic-embryo

External links
All peaks Col-0_somatic-embryo
Download BED file
Non redundant Col-0_somatic-embryo
Download BED file
Non redundant somatic-embryo
Download BED file
CRMs somatic-embryo
Download BED file

Datasets Table for somatic-embryo

Biotype Biotype modification Ecotype Target name Target modification Source Species Experiment Peaks
Col-0_somatic-embryo Col-0 BBM GEO Arabidopsis thaliana GSE52400 Download (16,508)
Biotype Biotype modification Ecotype Target name Target modification Source Species Experiment Peaks

ReMap is a database of transcriptional regulators peaks derived from curated ChIP-seq, ChIP-exo, DAP-seq experiments in Human and Thaliana.

You are using the 2020 ReMap (3rd) release.
The ReMap catalogues (2020, 2018, 2015) are under CC BY-NC 4.0 international license, while ReMapEnrich, remap-pipeline under GNU GPLv3 licence.

Inserm TAGC
AMU AMU-MESO

This work was granted access to the HPC resources of Aix-Marseille Université financed by the project Equip@Meso (ANR-10-EQPX-29-01) of the program "Investissements d’Avenir" supervised by the Agence Nationale de la Recherche.